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en:hpc:software:finflo [2015/03/17 14:37] (current)
vrintala created
Line 1: Line 1:
 +==== FINFLO ====
  
 +FINFLO is not installed to shared directory - yet.
 +
 +Example job script to run FINFLO:
 +
 +<file sh finflo_example.sh>
 +#!/bin/csh
 +###
 +### parallel job script example for FINFLO
 +###
 +
 +## name of your job
 +#SBATCH -J <yourcasenamehere>
 +
 +## system error message output file
 +#SBATCH -e <yourcasenamehere>.%j.stderr
 +
 +## system message output file
 +#SBATCH -o <yourcasenamehere>.%j.stdout
 +
 +## send mail after job is finished
 +#SBATCH --mail-type=end
 +#SBATCH --mail-user=<yourlutusername>@lut.fi
 +
 +## a per-process (soft) memory limit
 +## limit is specified in MB
 +## example: 1 GB is 1000
 +#SBATCH --mem-per-cpu=1900
 +
 +## how long a job takes, wallclock time d-hh:mm:ss
 +#SBATCH -t 1-12:00:00
 +
 +##the number of processes (number of cores)
 +## number of cores
 +#SBATCH -n 6
 +
 +##name of queue 
 +#SBATCH -p phase2
 +
 +## load FINFLO specific mpi library
 +module load mvapich/2-2.0-intel-finflo
 +
 +##change to calculation directory
 +cd /home/<yourusername>/<yourcasename>
 +
 +## run my MPI executable
 +## mvapich2
 +srun --mpi=none ./finflo -a -n <mycaseinput>
 +</file>
 
/opt/webdata/webroot/wiki/data/pages/en/hpc/software/finflo.txt · Last modified: 2015/03/17 14:37 by vrintala
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